Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
SESE_037306.g
View in Genome Browser
Position
Scaffold_387868:463458509-463474988 (-)
16479bp
Gene Type
gene
Gene Description (Protein Product)
SAGA-associated factor 11
Organism
Sequoia sempervirens
Also AS AT5G58575

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_042109.g Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery
SESE_043324.g Ubiquitin carboxyl-terminal hydrolase
SESE_070254.g Transcription initiation factor TFIID subunit
Regulatory gene
SESE_003751.g transcription factor
SESE_006675.g Zinc finger AN1 and C2H2 domain-containing stress-associated protein
SESE_007685.g Zinc finger AN1 and C2H2 domain-containing stress-associated protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail