Basic Information
Gene ID
Position
Scaffold_353338:1081875682-1081881933 (-)
6251bp
Gene Type
gene
Gene Description (Protein Product)
Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
Organism
Also AS AT3G08530

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_070744.g Epsin N-terminal homology (ENTH) domain
SESE_058288.g Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
SESE_057070.g Belongs to the adaptor complexes medium subunit family
Regulatory gene
SESE_001250.g NAC domain-containing protein
SESE_004082.g Myb family transcription factor
SESE_007476.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.