Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_045341.g
View in Genome Browser
Position
Scaffold_344217:493992439-493993710 (+)
1271bp
Gene Type
gene
Gene Description (Protein Product)
trichome branching
Organism
Sequoia sempervirens
Also AS AT3G12400

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_048677.g Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process
SESE_056396.g Belongs to the AAA ATPase family
SESE_072164.g Vacuolar protein-sorting-associated protein 37 homolog
Regulatory gene
SESE_001250.g NAC domain-containing protein
SESE_002563.g reveille
SESE_003268.g Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000813 ESCRT I complex CC
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005770 late endosome CC
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0010026 trichome differentiation BP
GO:0010090 trichome morphogenesis BP
GO:0010091 trichome branching BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0030154 cell differentiation BP
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032182 ubiquitin-like protein binding MF
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0036452 ESCRT complex CC
GO:0043130 ubiquitin binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048468 cell development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051301 cell division BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090558 plant epidermis development BP
GO:0090626 plant epidermis morphogenesis BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.