Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_056652.g
View in Genome Browser
Position
Scaffold_251294:13062477-13064678 (-)
2201bp
Gene Type
gene
Gene Description (Protein Product)
ER-dependent peroxisome localization
Organism
Sequoia sempervirens
Also AS AT3G24255

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_057566.g Belongs to the mitochondrial carrier (TC 2.A.29) family
SESE_072998.g Belongs to the mitochondrial carrier (TC 2.A.29) family
SESE_060781.g Peroxisomal membrane protein
Regulatory gene
SESE_001250.g NAC domain-containing protein
SESE_003751.g transcription factor
SESE_006675.g Zinc finger AN1 and C2H2 domain-containing stress-associated protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000038 very long-chain fatty acid metabolic process BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005778 peroxisomal membrane CC
GO:0005779 obsolete integral component of peroxisomal membrane CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0006082 organic acid metabolic process BP
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006625 protein targeting to peroxisome BP
GO:0006629 lipid metabolic process BP
GO:0006631 fatty acid metabolic process BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006996 organelle organization BP
GO:0007031 peroxisome organization BP
GO:0007276 gamete generation BP
GO:0007283 spermatogenesis BP
GO:0008022 obsolete protein C-terminus binding MF
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009062 fatty acid catabolic process BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0015919 peroxisomal membrane transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016042 lipid catabolic process BP
GO:0016043 cellular component organization BP
GO:0016054 organic acid catabolic process BP
GO:0016557 peroxisome membrane biogenesis BP
GO:0016558 protein import into peroxisome matrix BP
GO:0017038 protein import BP
GO:0019752 carboxylic acid metabolic process BP
GO:0019953 sexual reproduction BP
GO:0022406 membrane docking BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0022615 protein to membrane docking BP
GO:0031090 organelle membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031231 obsolete intrinsic component of peroxisomal membrane CC
GO:0031300 obsolete intrinsic component of organelle membrane CC
GO:0031301 obsolete integral component of organelle membrane CC
GO:0031903 microbody membrane CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032504 multicellular organism reproduction BP
GO:0032581 ER-dependent peroxisome organization BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042579 microbody CC
GO:0042760 very long-chain fatty acid catabolic process BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043574 peroxisomal transport BP
GO:0044085 cellular component biogenesis BP
GO:0044091 membrane biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044242 cellular lipid catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044438 obsolete microbody part CC
GO:0044439 obsolete peroxisomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044743 protein transmembrane import into intracellular organelle BP
GO:0045046 protein import into peroxisome membrane BP
GO:0045184 establishment of protein localization BP
GO:0046395 carboxylic acid catabolic process BP
GO:0046907 intracellular transport BP
GO:0048137 spermatocyte division BP
GO:0048232 male gamete generation BP
GO:0048609 multicellular organismal reproductive process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051301 cell division BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051704 obsolete multi-organism process BP
GO:0055085 transmembrane transport BP
GO:0065002 intracellular protein transmembrane transport BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0071806 protein transmembrane transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072329 monocarboxylic acid catabolic process BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072657 protein localization to membrane BP
GO:0072662 protein localization to peroxisome BP
GO:0072663 establishment of protein localization to peroxisome BP
GO:0090150 establishment of protein localization to membrane BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:0098827 endoplasmic reticulum subcompartment CC
GO:0106101 ER-dependent peroxisome localization BP
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.