PPGR - Gene Detail

Basic Information

Gene ID	SESE_057138.g View in Genome Browser
Position	Scaffold_180119:4196-7356 (-) 3160bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the malate synthase family
Organism	Sequoia sempervirens
Also AS	AT5G03860

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_073005.g The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells

SESE_073414.g acetyltransferase component of pyruvate dehydrogenase

SESE_065124.g citrate synthase

Regulatory gene

SESE_003751.g transcription factor

SESE_004082.g Myb family transcription factor

SESE_006675.g Zinc finger AN1 and C2H2 domain-containing stress-associated protein

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004474	malate synthase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005777	peroxisome	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0006081	cellular aldehyde metabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006097	glyoxylate cycle	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009514	glyoxysome	CC
GO:0009987	cellular process	BP
GO:0016740	transferase activity	MF
GO:0016746	acyltransferase activity	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0042579	microbody	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046487	glyoxylate metabolic process	BP
GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	MF
GO:0071704	organic substance metabolic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00620	Pyruvate metabolism	-