PPGR - Gene Detail

Basic Information

Gene ID	SESE_057826.g View in Genome Browser
Position	Scaffold_140625:42548-56764 (+) 14216bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the protein kinase superfamily
Organism	Sequoia sempervirens
Also AS	AT1G52540

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_146426.g protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. In the complex, it probably acts as the catalytic center that mediates the cleavage of Nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex (By similarity). The CSN complex is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Involved in CSN's deneddylation derubylation activity. Required for the deneddylation of all cullins. Essential for the structural integrity of the CSN holocomplex

SESE_098217.g meprin and TRAF homology

SESE_070120.g Speckle-type POZ protein-like protein

Regulatory gene

SESE_007476.g dof zinc finger protein

SESE_022567.g dof zinc finger protein

SESE_117723.g Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004672	protein kinase activity	MF
GO:0004674	protein serine/threonine kinase activity	MF
GO:0004675	transmembrane receptor protein serine/threonine kinase activity	MF
GO:0004888	transmembrane signaling receptor activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006464	protein modification process	BP
GO:0006468	protein phosphorylation	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0007166	cell surface receptor signaling pathway	BP
GO:0007167	enzyme-linked receptor protein signaling pathway	BP
GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009987	cellular process	BP
GO:0016020	membrane	CC
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016773	phosphotransferase activity, alcohol group as acceptor	MF
GO:0019199	transmembrane receptor protein kinase activity	MF
GO:0019538	protein metabolic process	BP
GO:0023052	signaling	BP
GO:0036211	protein modification process	BP
GO:0038023	signaling receptor activity	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044464	obsolete cell part	CC
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0060089	molecular transducer activity	MF
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071944	cell periphery	CC
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP