Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_066094.g
View in Genome Browser
Position
Scaffold_122524:146330-146917 (+)
587bp
Gene Type
gene
Gene Description (Protein Product)
"Calmodulin mediates the control of a large number of enzymes
Organism
Sequoia sempervirens
Also AS AT5G21274

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_070136.g calcium ion binding
SESE_072752.g mitogen-activated protein kinase
SESE_086041.g Belongs to the short-chain dehydrogenases reductases (SDR) family
Regulatory gene
SESE_007476.g dof zinc finger protein
SESE_007952.g Zinc-finger homeodomain protein
SESE_016695.g ZF-HD protein dimerisation region

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005509 calcium ion binding MF
GO:0005513 detection of calcium ion BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005911 cell-cell junction CC
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009506 plasmodesma CC
GO:0009593 detection of chemical stimulus BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009612 response to mechanical stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009642 response to light intensity BP
GO:0009646 response to absence of light BP
GO:0009652 thigmotropism BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010099 regulation of photomorphogenesis BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0015630 microtubule cytoskeleton CC
GO:0016020 membrane CC
GO:0019222 regulation of metabolic process BP
GO:0019722 calcium-mediated signaling BP
GO:0019932 second-messenger-mediated signaling BP
GO:0023052 signaling BP
GO:0030054 cell junction CC
GO:0030656 regulation of vitamin metabolic process BP
GO:0031090 organelle membrane CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0035556 intracellular signal transduction BP
GO:0042221 response to chemical BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043255 regulation of carbohydrate biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0048580 regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051193 obsolete regulation of cofactor metabolic process BP
GO:0051196 obsolete regulation of coenzyme metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051592 response to calcium ion BP
GO:0051606 detection of stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055044 symplast CC
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0080090 regulation of primary metabolic process BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:2000026 regulation of multicellular organismal development BP
GO:2000030 regulation of response to red or far red light BP
GO:2000082 regulation of L-ascorbic acid biosynthetic process BP
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map04070 Phosphatidylinositol signaling system -