PPGR - Gene Detail

Basic Information

Gene ID	SESE_070234.g View in Genome Browser
Position	Scaffold_49325:78916-79792 (-) 876bp
Gene Type	gene
Gene Description (Protein Product)	Formyltetrahydrofolate deformylase
Organism	Sequoia sempervirens
Also AS	AT4G17360

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_071122.g Malate dehydrogenase

SESE_073005.g The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells

SESE_075199.g phosphoribosylglycinamide formyltransferase

Regulatory gene

SESE_002563.g reveille

SESE_003268.g Transcription factor

SESE_003364.g isoform X1

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006082	organic acid metabolic process	BP
GO:0006575	cellular modified amino acid metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006760	folic acid-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009853	photorespiration	BP
GO:0009987	cellular process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042558	pteridine-containing compound metabolic process	BP
GO:0043094	cellular metabolic compound salvage	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043603	amide metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0046653	tetrahydrofolate metabolic process	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00670	One carbon pool by folate	-
map00630	Glyoxylate and dicarboxylate metabolism	-