PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	SESE_073145.g View in Genome Browser
Position	Scaffold_6215:539291374-539298314 (+) 6940bp
Gene Type	gene
Gene Description (Protein Product)	domain-containing protein
Organism	Sequoia sempervirens
Also AS	AT1G77460

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_073368.g Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

SESE_122949.g Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

SESE_083936.g Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

Regulatory gene

SESE_001250.g NAC domain-containing protein

SESE_001495.g B3 domain-containing protein

SESE_007476.g dof zinc finger protein

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000271	polysaccharide biosynthetic process	BP
GO:0000902	cell morphogenesis	BP
GO:0002682	regulation of immune system process	BP
GO:0002683	negative regulation of immune system process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004842	ubiquitin-protein transferase activity	MF
GO:0005102	signaling receptor binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005856	cytoskeleton	CC
GO:0005874	microtubule	CC
GO:0005881	cytoplasmic microtubule	CC
GO:0005886	plasma membrane	CC
GO:0005938	cell cortex	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005976	polysaccharide metabolic process	BP
GO:0006073	cellular glucan metabolic process	BP
GO:0006464	protein modification process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0008104	protein localization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009250	glucan biosynthetic process	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009664	plant-type cell wall organization	BP
GO:0009826	unidimensional cell growth	BP
GO:0009832	plant-type cell wall biogenesis	BP
GO:0009987	cellular process	BP
GO:0010330	cellulose synthase complex	CC
GO:0010383	cell wall polysaccharide metabolic process	BP
GO:0010941	regulation of cell death	BP
GO:0015630	microtubule cytoskeleton	CC
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016049	cell growth	BP
GO:0016051	carbohydrate biosynthetic process	BP
GO:0016567	protein ubiquitination	BP
GO:0016740	transferase activity	MF
GO:0019538	protein metabolic process	BP
GO:0019787	ubiquitin-like protein transferase activity	MF
GO:0030243	cellulose metabolic process	BP
GO:0030244	cellulose biosynthetic process	BP
GO:0030863	cortical cytoskeleton	CC
GO:0030981	cortical microtubule cytoskeleton	CC
GO:0032446	protein modification by small protein conjugation	BP
GO:0032502	developmental process	BP
GO:0032989	cellular component morphogenesis	BP
GO:0032991	protein-containing complex	CC
GO:0033036	macromolecule localization	BP
GO:0033365	protein localization to organelle	BP
GO:0033612	receptor serine/threonine kinase binding	MF
GO:0033692	cellular polysaccharide biosynthetic process	BP
GO:0034613	protein localization	BP
GO:0034637	cellular carbohydrate biosynthetic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0036211	protein modification process	BP
GO:0040007	growth	BP
GO:0042546	cell wall biogenesis	BP
GO:0042742	defense response to bacterium	BP
GO:0042981	regulation of apoptotic process	BP
GO:0043066	negative regulation of apoptotic process	BP
GO:0043067	regulation of programmed cell death	BP
GO:0043069	negative regulation of programmed cell death	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0044036	cell wall macromolecule metabolic process	BP
GO:0044038	cell wall macromolecule biosynthetic process	BP
GO:0044042	glucan metabolic process	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044264	cellular polysaccharide metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044380	protein localization to cytoskeleton	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044448	obsolete cell cortex part	CC
GO:0044464	obsolete cell part	CC
GO:0045229	external encapsulating structure organization	BP
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0048580	regulation of post-embryonic development	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048585	negative regulation of response to stimulus	BP
GO:0048589	developmental growth	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050776	regulation of immune response	BP
GO:0050777	negative regulation of immune response	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051273	beta-glucan metabolic process	BP
GO:0051274	beta-glucan biosynthetic process	BP
GO:0051641	cellular localization	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0052324	plant-type cell wall cellulose biosynthetic process	BP
GO:0052541	plant-type cell wall cellulose metabolic process	BP
GO:0055028	cortical microtubule	CC
GO:0060548	negative regulation of cell death	BP
GO:0060560	developmental growth involved in morphogenesis	BP
GO:0065007	biological regulation	BP
GO:0070589	cellular component macromolecule biosynthetic process	BP
GO:0070592	cell wall polysaccharide biosynthetic process	BP
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0070696	transmembrane receptor protein serine/threonine kinase binding	MF
GO:0070727	cellular macromolecule localization	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071555	cell wall organization	BP
GO:0071669	plant-type cell wall organization or biogenesis	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0072697	protein localization to cell cortex	BP
GO:0072698	protein localization to microtubule cytoskeleton	BP
GO:0072699	protein localization to cortical microtubule cytoskeleton	BP
GO:0098542	defense response to other organism	BP
GO:0099080	supramolecular complex	CC
GO:0099081	supramolecular polymer	CC
GO:0099512	supramolecular fiber	CC
GO:0099513	polymeric cytoskeletal fiber	CC
GO:0099568	cytoplasmic region	CC
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC
GO:1990778	protein localization to cell periphery	BP
GO:2000026	regulation of multicellular organismal development	BP
GO:2000028	regulation of photoperiodism, flowering	BP
GO:2000241	regulation of reproductive process	BP