Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_073902.g
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Position
Scaffold_346614:391650-415558 (-)
23908bp
Gene Type
gene
Gene Description (Protein Product)
Splicing factor 3B subunit
Organism
Sequoia sempervirens
Also AS AT2G18510

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_075167.g splicing factor 3A subunit
SESE_074084.g Pre-mRNA-splicing factor
SESE_100845.g Guanine nucleotide-binding protein subunit beta-like protein
Regulatory gene
SESE_007476.g dof zinc finger protein
SESE_007952.g Zinc-finger homeodomain protein
SESE_016695.g ZF-HD protein dimerisation region

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.