PPGR - Gene Detail

Basic Information

Gene ID	SESE_090294.g View in Genome Browser
Position	Scaffold_148530:63220-63601 (-) 381bp
Gene Type	gene
Gene Description (Protein Product)	transcription factor
Organism	Sequoia sempervirens
Also AS	AT1G15360

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_100072.g protein Sb04g004280 source

SESE_100369.g protein Sb04g004280 source

SESE_108156.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

SESE_007476.g dof zinc finger protein

SESE_007952.g Zinc-finger homeodomain protein

SESE_016695.g ZF-HD protein dimerisation region

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000160	phosphorelay signal transduction system	BP
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006950	response to stress	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009414	response to water deprivation	BP
GO:0009415	response to water	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009723	response to ethylene	BP
GO:0009725	response to hormone	BP
GO:0009755	hormone-mediated signaling pathway	BP
GO:0009873	ethylene-activated signaling pathway	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010035	response to inorganic substance	BP
GO:0010143	cutin biosynthetic process	BP
GO:0010166	wax metabolic process	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0023052	signaling	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032870	cellular response to hormone stimulus	BP
GO:0035556	intracellular signal transduction	BP
GO:0042221	response to chemical	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043565	sequence-specific DNA binding	MF
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071310	cellular response to organic substance	BP
GO:0071369	cellular response to ethylene stimulus	BP
GO:0071495	cellular response to endogenous stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0140110	transcription regulator activity	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901568	fatty acid derivative metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP