Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_097788.g
View in Genome Browser
Position
Scaffold_6407:70058033-70060138 (+)
2105bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the actin family
Organism
Sequoia sempervirens
Also AS AT5G09810

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_102089.g Belongs to the actin-binding proteins ADF family
SESE_119808.g Non-specific serine threonine protein kinase
SESE_138044.g xyloglucan galactosyltransferase
Regulatory gene
SESE_007476.g dof zinc finger protein
SESE_021118.g Agamous-like MADS-box protein
SESE_022567.g dof zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000287 magnesium ion binding MF
GO:0001725 stress fiber CC
GO:0003674 molecular_function MF
GO:0003779 actin binding MF
GO:0003785 actin monomer binding MF
GO:0005488 binding MF
GO:0005509 calcium ion binding MF
GO:0005515 protein binding MF
GO:0005523 tropomyosin binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005856 cytoskeleton CC
GO:0005858 axonemal dynein complex CC
GO:0005865 striated muscle thin filament CC
GO:0005875 microtubule associated complex CC
GO:0005884 actin filament CC
GO:0005929 cilium CC
GO:0005930 axoneme CC
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007015 actin filament organization BP
GO:0007275 multicellular organism development BP
GO:0007517 muscle organ development BP
GO:0007519 skeletal muscle tissue development BP
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008154 actin polymerization or depolymerization BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009887 animal organ morphogenesis BP
GO:0009888 tissue development BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010468 regulation of gene expression BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0010927 cellular component assembly involved in morphogenesis BP
GO:0014706 striated muscle tissue development BP
GO:0014866 skeletal myofibril assembly BP
GO:0014902 myotube differentiation BP
GO:0014904 myotube cell development BP
GO:0015629 actin cytoskeleton CC
GO:0015630 microtubule cytoskeleton CC
GO:0016043 cellular component organization BP
GO:0017022 myosin binding MF
GO:0019222 regulation of metabolic process BP
GO:0019904 protein domain specific binding MF
GO:0022607 cellular component assembly BP
GO:0030016 myofibril CC
GO:0030017 sarcomere CC
GO:0030027 lamellipodium CC
GO:0030029 actin filament-based process BP
GO:0030036 actin cytoskeleton organization BP
GO:0030041 actin filament polymerization BP
GO:0030154 cell differentiation BP
GO:0030175 filopodium CC
GO:0030239 myofibril assembly BP
GO:0030240 skeletal muscle thin filament assembly BP
GO:0030286 dynein complex CC
GO:0031013 troponin I binding MF
GO:0031032 actomyosin structure organization BP
GO:0031252 cell leading edge CC
GO:0031432 titin binding MF
GO:0031941 filamentous actin CC
GO:0032036 myosin heavy chain binding MF
GO:0032432 actin filament bundle CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032781 positive regulation of ATP-dependent activity BP
GO:0032838 plasma membrane bounded cell projection cytoplasm CC
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0034622 protein-containing complex assembly BP
GO:0036156 inner dynein arm CC
GO:0036379 myofilament CC
GO:0042641 actomyosin CC
GO:0042692 muscle cell differentiation BP
GO:0042802 identical protein binding MF
GO:0042995 cell projection CC
GO:0043085 positive regulation of catalytic activity BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043292 contractile fiber CC
GO:0043462 regulation of ATP-dependent activity BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044093 positive regulation of molecular function BP
GO:0044297 cell body CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044441 obsolete ciliary part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044447 obsolete axoneme part CC
GO:0044449 obsolete contractile fiber part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0048306 calcium-dependent protein binding MF
GO:0048468 cell development BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048729 tissue morphogenesis BP
GO:0048731 system development BP
GO:0048741 skeletal muscle fiber development BP
GO:0048747 muscle cell development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0051017 actin filament bundle assembly BP
GO:0051146 striated muscle cell differentiation BP
GO:0051258 protein polymerization BP
GO:0051336 regulation of hydrolase activity BP
GO:0051345 positive regulation of hydrolase activity BP
GO:0055001 muscle cell development BP
GO:0055002 striated muscle cell development BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060485 mesenchyme development BP
GO:0060537 muscle tissue development BP
GO:0060538 skeletal muscle organ development BP
GO:0061061 muscle structure development BP
GO:0061572 actin filament bundle organization BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070925 organelle assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072132 mesenchyme morphogenesis BP
GO:0090130 tissue migration BP
GO:0090131 mesenchyme migration BP
GO:0097014 ciliary plasm CC
GO:0097435 supramolecular fiber organization BP
GO:0097517 contractile actin filament bundle CC
GO:0098723 skeletal muscle myofibril CC
GO:0098858 actin-based cell projection CC
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099568 cytoplasmic region CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:1902494 catalytic complex CC
GO:1904621 obsolete regulation of microfilament motor activity BP
GO:1904623 obsolete positive regulation of microfilament motor activity BP
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.