Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_107357.g
View in Genome Browser
Position
Scaffold_147994:84308-85780 (-)
1472bp
Gene Type
gene
Gene Description (Protein Product)
tocopherol cyclase
Organism
Sequoia sempervirens
Also AS AT4G32770

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_108198.g homogentisate phytyltransferase 1
SESE_135535.g Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ MBSQ MT family
SESE_129187.g Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ MBSQ MT family
Regulatory gene
SESE_002563.g reveille
SESE_003268.g Transcription factor
SESE_003364.g isoform X1

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006631 fatty acid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006766 vitamin metabolic process BP
GO:0006775 fat-soluble vitamin metabolic process BP
GO:0006778 porphyrin-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008643 carbohydrate transport BP
GO:0009058 biosynthetic process BP
GO:0009110 vitamin biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009528 plastid inner membrane CC
GO:0009532 plastid stroma CC
GO:0009534 chloroplast thylakoid CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009579 thylakoid CC
GO:0009628 response to abiotic stimulus BP
GO:0009642 response to light intensity BP
GO:0009644 response to high light intensity BP
GO:0009651 response to salt stress BP
GO:0009706 chloroplast inner membrane CC
GO:0009915 phloem sucrose loading BP
GO:0009941 chloroplast envelope CC
GO:0009975 cyclase activity MF
GO:0009976 tocopherol cyclase activity MF
GO:0009987 cellular process BP
GO:0010189 vitamin E biosynthetic process BP
GO:0010232 vascular transport BP
GO:0010233 phloem transport BP
GO:0010287 plastoglobule CC
GO:0015766 disaccharide transport BP
GO:0015770 sucrose transport BP
GO:0015772 oligosaccharide transport BP
GO:0015994 chlorophyll metabolic process BP
GO:0016020 membrane CC
GO:0016108 tetraterpenoid metabolic process BP
GO:0016116 carotenoid metabolic process BP
GO:0016122 xanthophyll metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0019866 organelle inner membrane CC
GO:0031090 organelle membrane CC
GO:0031347 regulation of defense response BP
GO:0031967 organelle envelope CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0033013 tetrapyrrole metabolic process BP
GO:0042170 plastid membrane CC
GO:0042360 vitamin E metabolic process BP
GO:0042362 fat-soluble vitamin biosynthetic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048583 regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051234 establishment of localization BP
GO:0065007 biological regulation BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0080134 regulation of response to stress BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00130 Ubiquinone and other terpenoid-quinone biosynthesis Ubiquinone (UQ), also called coenzyme Q, and plastoquinone (PQ) are electron carriers in oxidative phosphorylation and photosynthesis, respectively. The quinoid nucleus of ubiquinone is derived from the shikimate pathway; 4-hydroxybenzoate is directly formed from chorismate in bacteria, while it can be formed from either chorismate or tyrosine in yeast. The following biosynthesis of terpenoid moiety involves reactions of prenylation, decarboxylation, and three hydroxylations alternating with three methylations. The order of these reactions are somewhat different between bacteria and yeast. Phylloquinone (vitamin K1), menaquinone (vitamin K2), and tocopherol (vitamin E) are fat-soluble vitamins. Phylloquinone is a compound present in all photosynthetic plants serving as a cofactor for photosystem I-mediated electron transport. Menaquinone is an obligatory component of the electron-transfer pathway in bacteria.