Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_112843.g
View in Genome Browser
Position
Scaffold_160839:199157-214649 (-)
15492bp
Gene Type
gene
Gene Description (Protein Product)
Polyadenylate-binding protein-interacting protein
Organism
Sequoia sempervirens
Also AS AT3G14010

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_117715.g Protein LSM12 homolog
SESE_146775.g elf4-like
SESE_120045.g Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes
Regulatory gene
SESE_001250.g NAC domain-containing protein
SESE_001370.g Transcription factor
SESE_001495.g B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010494 cytoplasmic stress granule CC
GO:0010603 regulation of cytoplasmic mRNA processing body assembly BP
GO:0016043 cellular component organization BP
GO:0022607 cellular component assembly BP
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0022618 ribonucleoprotein complex assembly BP
GO:0032991 protein-containing complex CC
GO:0033043 regulation of organelle organization BP
GO:0034063 stress granule assembly BP
GO:0034622 protein-containing complex assembly BP
GO:0035770 ribonucleoprotein granule CC
GO:0036464 cytoplasmic ribonucleoprotein granule CC
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043254 regulation of protein-containing complex assembly BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051128 regulation of cellular component organization BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0070925 organelle assembly BP
GO:0071826 ribonucleoprotein complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1902115 regulation of organelle assembly BP
GO:1990904 ribonucleoprotein complex CC