PPGR - Gene Detail

Basic Information

Gene ID	SESE_117122.g View in Genome Browser
Position	Scaffold_101355:119-6241 (+) 6122bp
Gene Type	gene
Gene Description (Protein Product)	Isoamylase 3
Organism	Sequoia sempervirens
Also AS	AT4G09020

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_119531.g 1,4-alpha-glucan-branching enzyme

SESE_125906.g 4-alpha-glucanotransferase

SESE_117939.g Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000272	polysaccharide catabolic process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004133	glycogen debranching enzyme activity	MF
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005976	polysaccharide metabolic process	BP
GO:0005977	glycogen metabolic process	BP
GO:0005982	starch metabolic process	BP
GO:0005983	starch catabolic process	BP
GO:0006073	cellular glucan metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006112	energy reserve metabolic process	BP
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009251	glucan catabolic process	BP
GO:0009501	amyloplast	CC
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009569	chloroplast starch grain	CC
GO:0009570	chloroplast stroma	CC
GO:0009657	plastid organization	BP
GO:0009660	amyloplast organization	BP
GO:0009987	cellular process	BP
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0016043	cellular component organization	BP
GO:0016052	carbohydrate catabolic process	BP
GO:0016787	hydrolase activity	MF
GO:0016798	hydrolase activity, acting on glycosyl bonds	MF
GO:0019156	isoamylase activity	MF
GO:0043036	starch grain	CC
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044042	glucan metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044247	cellular polysaccharide catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044264	cellular polysaccharide metabolic process	BP
GO:0044275	cellular carbohydrate catabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00500	Starch and sucrose metabolism	-