PPGR - Gene Detail

Basic Information

Gene ID	SESE_123011.g View in Genome Browser
Position	Scaffold_152400:5399289-5414884 (+) 15595bp
Gene Type	gene
Gene Description (Protein Product)	Mannose-1-phosphate
Organism	Sequoia sempervirens
Also AS	AT2G39770

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_146426.g protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. In the complex, it probably acts as the catalytic center that mediates the cleavage of Nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex (By similarity). The CSN complex is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Involved in CSN's deneddylation derubylation activity. Required for the deneddylation of all cullins. Essential for the structural integrity of the CSN holocomplex

SESE_123467.g UDP-D-apiose UDP-D-xylose synthase

SESE_142824.g xylulose

Regulatory gene

SESE_000605.g transcription factor

SESE_000978.g Transcription factor

SESE_002642.g transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00520	Amino sugar and nucleotide sugar metabolism	-
map00051	Fructose and mannose metabolism	-