PPGR - Gene Detail

Basic Information

Gene ID	SESE_125231.g View in Genome Browser
Position	Scaffold_123671:26091069-26091500 (-) 431bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the actin-binding proteins ADF family
Organism	Sequoia sempervirens
Also AS	AT2G16700

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_131298.g cellular macromolecule catabolic process

SESE_140173.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

SESE_139408.g histone H2B

Regulatory gene

SESE_004139.g homeobox-leucine zipper protein

SESE_007476.g dof zinc finger protein

SESE_007952.g Zinc-finger homeodomain protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0006996	organelle organization	BP
GO:0007010	cytoskeleton organization	BP
GO:0007015	actin filament organization	BP
GO:0008150	biological_process	BP
GO:0008154	actin polymerization or depolymerization	BP
GO:0009987	cellular process	BP
GO:0016043	cellular component organization	BP
GO:0022607	cellular component assembly	BP
GO:0030029	actin filament-based process	BP
GO:0030036	actin cytoskeleton organization	BP
GO:0030041	actin filament polymerization	BP
GO:0034622	protein-containing complex assembly	BP
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0051017	actin filament bundle assembly	BP
GO:0051258	protein polymerization	BP
GO:0061572	actin filament bundle organization	BP
GO:0065003	protein-containing complex assembly	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0097435	supramolecular fiber organization	BP