PPGR - Gene Detail

Basic Information

Gene ID	SESE_132343.g View in Genome Browser
Position	Scaffold_152400:419928830-419929534 (+) 704bp
Gene Type	gene
Gene Description (Protein Product)	Photosystem I reaction center subunit III
Organism	Sequoia sempervirens
Also AS	AT1G31330

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

SESE_140947.g Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I

SESE_135244.g NDH shuttles electrons from NAD(P)H plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient

SESE_146492.g Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions

Regulatory gene

SESE_002563.g reveille

SESE_003268.g Transcription factor

SESE_003364.g isoform X1

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0009507	chloroplast	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009536	plastid	CC
GO:0009543	chloroplast thylakoid lumen	CC
GO:0009579	thylakoid	CC
GO:0031976	plastid thylakoid	CC
GO:0031977	thylakoid lumen	CC
GO:0031978	plastid thylakoid lumen	CC
GO:0031984	organelle subcompartment	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00195	Photosynthesis	Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.