Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_139782.g
View in Genome Browser
Position
Scaffold_257138:19570-19962 (+)
392bp
Gene Type
gene
Gene Description (Protein Product)
mitogen-activated protein kinase kinase
Organism
Sequoia sempervirens
Also AS AT1G51660

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_141880.g transcription factor
SESE_146426.g protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. In the complex, it probably acts as the catalytic center that mediates the cleavage of Nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex (By similarity). The CSN complex is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Involved in CSN's deneddylation derubylation activity. Required for the deneddylation of all cullins. Essential for the structural integrity of the CSN holocomplex
SESE_140751.g belongs to the protein kinase superfamily
Regulatory gene
SESE_007476.g dof zinc finger protein
SESE_022567.g dof zinc finger protein
SESE_047518.g bpc6, bbr bpc6, atbpc6 atbpc6

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000160 phosphorelay signal transduction system BP
GO:0000165 MAPK cascade BP
GO:0000187 obsolete activation of MAPK activity BP
GO:0001101 response to acid chemical BP
GO:0001932 regulation of protein phosphorylation BP
GO:0001934 positive regulation of protein phosphorylation BP
GO:0002229 defense response to oomycetes BP
GO:0002239 response to oomycetes BP
GO:0002376 immune system process BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004672 protein kinase activity MF
GO:0004674 protein serine/threonine kinase activity MF
GO:0004708 MAP kinase kinase activity MF
GO:0004712 protein serine/threonine/tyrosine kinase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0006970 response to osmotic stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0007568 aging BP
GO:0008047 enzyme activator activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009403 toxin biosynthetic process BP
GO:0009404 toxin metabolic process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009611 response to wounding BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009627 systemic acquired resistance BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009692 ethylene metabolic process BP
GO:0009693 ethylene biosynthetic process BP
GO:0009700 indole phytoalexin biosynthetic process BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009751 response to salicylic acid BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009791 post-embryonic development BP
GO:0009814 defense response to other organism BP
GO:0009838 abscission BP
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway BP
GO:0009863 salicylic acid mediated signaling pathway BP
GO:0009873 ethylene-activated signaling pathway BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009908 flower development BP
GO:0009914 hormone transport BP
GO:0009926 auxin polar transport BP
GO:0009966 regulation of signal transduction BP
GO:0009967 positive regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010120 camalexin biosynthetic process BP
GO:0010150 leaf senescence BP
GO:0010227 floral organ abscission BP
GO:0010229 inflorescence development BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010562 positive regulation of phosphorus metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0010646 regulation of cell communication BP
GO:0010647 positive regulation of cell communication BP
GO:0010817 regulation of hormone levels BP
GO:0014070 response to organic cyclic compound BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019207 kinase regulator activity MF
GO:0019209 kinase activator activity MF
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019538 protein metabolic process BP
GO:0019748 secondary metabolic process BP
GO:0019887 protein kinase regulator activity MF
GO:0022414 reproductive process BP
GO:0023014 signal transduction BP
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0023056 positive regulation of signaling BP
GO:0030234 enzyme regulator activity MF
GO:0030295 protein kinase activator activity MF
GO:0031098 stress-activated protein kinase signaling cascade BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031399 regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0032147 activation of protein kinase activity BP
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0033554 cellular response to stress BP
GO:0033674 positive regulation of kinase activity BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0035556 intracellular signal transduction BP
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0036211 protein modification process BP
GO:0042221 response to chemical BP
GO:0042325 regulation of phosphorylation BP
GO:0042327 positive regulation of phosphorylation BP
GO:0042430 indole-containing compound metabolic process BP
GO:0042435 indole-containing compound biosynthetic process BP
GO:0042445 hormone metabolic process BP
GO:0042446 hormone biosynthetic process BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042742 defense response to bacterium BP
GO:0043085 positive regulation of catalytic activity BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043405 regulation of MAP kinase activity BP
GO:0043406 positive regulation of MAP kinase activity BP
GO:0043408 regulation of MAPK cascade BP
GO:0043410 positive regulation of MAPK cascade BP
GO:0043412 macromolecule modification BP
GO:0043449 cellular alkene metabolic process BP
GO:0043450 alkene biosynthetic process BP
GO:0043549 regulation of kinase activity BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044272 sulfur compound biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044550 secondary metabolite biosynthetic process BP
GO:0045087 innate immune response BP
GO:0045859 regulation of protein kinase activity BP
GO:0045860 positive regulation of protein kinase activity BP
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0045937 positive regulation of phosphate metabolic process BP
GO:0046217 indole phytoalexin metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046677 response to antibiotic BP
GO:0046777 protein autophosphorylation BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0051338 regulation of transferase activity BP
GO:0051347 positive regulation of transferase activity BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0051726 regulation of cell cycle BP
GO:0052314 phytoalexin metabolic process BP
GO:0052315 phytoalexin biosynthetic process BP
GO:0052317 camalexin metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060918 auxin transport BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071229 cellular response to acid chemical BP
GO:0071236 cellular response to antibiotic BP
GO:0071310 cellular response to organic substance BP
GO:0071369 cellular response to ethylene stimulus BP
GO:0071407 cellular response to organic cyclic compound BP
GO:0071446 cellular response to salicylic acid stimulus BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071900 regulation of protein serine/threonine kinase activity BP
GO:0071902 positive regulation of protein serine/threonine kinase activity BP
GO:0080090 regulation of primary metabolic process BP
GO:0090567 reproductive shoot system development BP
GO:0090693 plant organ senescence BP
GO:0098542 defense response to other organism BP
GO:0098772 molecular function regulator activity MF
GO:0099402 plant organ development BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1900673 olefin metabolic process BP
GO:1900674 olefin biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902531 regulation of intracellular signal transduction BP
GO:1902533 positive regulation of intracellular signal transduction BP
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP