Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_141851.g
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Position
Scaffold_195192:480124588-480124977 (+)
389bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the syntaxin family
Organism
Sequoia sempervirens
Also AS AT1G61290

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_144776.g Cytidylyltransferase-like
SESE_144333.g Phosphopantetheine adenylyltransferase
SESE_147708.g U5 small nuclear ribonucleoprotein 40 kDa
Regulatory gene
SESE_006940.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
SESE_007952.g Zinc-finger homeodomain protein
SESE_016695.g ZF-HD protein dimerisation region

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006950 response to stress BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022406 membrane docking BP
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046903 secretion BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090174 organelle membrane fusion BP
GO:0098796 membrane protein complex CC
GO:0140056 organelle localization by membrane tethering BP
KEGG Term Name Description
map04130 SNARE interactions in vesicular transport -
map01100 Metabolic pathways -
map00770 Pantothenate and CoA biosynthesis -