Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
GSVIVG01013428001.Genoscope12X.g
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Position
chr18:531976-535425 (+)
3449bp
Gene Type
gene
Gene Description (Protein Product)
SWI SNF complex subunit
Organism
Vitis vinifera
Also AS AT2G33610Vitvi18g00045

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
GSVIVG01017710001.Genoscope12X.g Chromatin structure-remodeling complex protein
GSVIVG01031951001.Genoscope12X.g SWI SNF complex subunit
GSVIVG01017921001.Genoscope12X.g ATP-dependent DNA helicase CHR12
Regulatory gene
GSVIVG01001696001.Genoscope12X.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
GSVIVG01002242001.Genoscope12X.g dof zinc finger protein
GSVIVG01003212001.Genoscope12X.g B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000228 nuclear chromosome CC
GO:0000785 chromatin CC
GO:0000790 chromatin CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0006325 chromatin organization BP
GO:0006338 chromatin remodeling BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016514 SWI/SNF complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0051276 chromosome organization BP
GO:0070013 intracellular organelle lumen CC
GO:0070603 SWI/SNF superfamily-type complex CC
GO:0071840 cellular component organization or biogenesis BP
GO:1902494 catalytic complex CC
GO:1904949 ATPase complex CC