Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
GSVIVG01032675001.Genoscope12X.g
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Position
chr13:1602971-1606839 (+)
3868bp
Gene Type
gene
Gene Description (Protein Product)
radicals which are normally produced within the cells and which are toxic to biological systems
Organism
Vitis vinifera
Also AS AT3G10920Vitvi13g00177

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
GSVIVG01033413001.Genoscope12X.g Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GSVIVG01035240001.Genoscope12X.g Belongs to the isocitrate and isopropylmalate dehydrogenases family
GSVIVG01038138001.Genoscope12X.g ribosomal protein L51
Regulatory gene
GSVIVG01000012001.Genoscope12X.g transcription factor
GSVIVG01000318001.Genoscope12X.g histone deacetylase
GSVIVG01000386001.Genoscope12X.g Zinc-finger homeodomain protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.