Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
GSVIVG01035251001.Genoscope12X.g
View in Genome Browser
Position
chr4:11381698-11383195 (+)
1497bp
Gene Type
gene
Gene Description (Protein Product)
rna polymerase
Organism
Vitis vinifera
Also AS ATCG00190

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
GSVIVG01036004001.Genoscope12X.g DNA-directed RNA polymerases II, IV and V subunit
GSVIVG01038034001.Genoscope12X.g Transcription elongation factor SPT5
GSVIVG01036642001.Genoscope12X.g DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Regulatory gene
GSVIVG01000089001.Genoscope12X.g Protein ALWAYS EARLY
GSVIVG01000232001.Genoscope12X.g transcription
GSVIVG01000449001.Genoscope12X.g Myb-related protein Myb4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000428 DNA-directed RNA polymerase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0030880 RNA polymerase complex CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC
KEGG Term Name Description
map03020 RNA polymerase -