Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
GSVIVG01035450001.Genoscope12X.g
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Position
chr4:1355371-1359837 (-)
4466bp
Gene Type
gene
Gene Description (Protein Product)
thermospermine synthase
Organism
Vitis vinifera
Also AS AT5G19530Vitvi04g00148

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
GSVIVG01035927001.Genoscope12X.g Belongs to the universal ribosomal protein uS17 family
GSVIVG01035586001.Genoscope12X.g Acetylglutamate kinase
GSVIVG01038778001.Genoscope12X.g protein-S-isoprenylcysteine O-methyltransferase
Regulatory gene
GSVIVG01000802001.Genoscope12X.g Floral homeotic protein
GSVIVG01001437001.Genoscope12X.g Agamous-like MADS-box protein AGL15
GSVIVG01001701001.Genoscope12X.g transcription regulatory region sequence-specific DNA binding

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0009888 tissue development BP
GO:0009914 hormone transport BP
GO:0009926 auxin polar transport BP
GO:0009987 cellular process BP
GO:0010087 phloem or xylem histogenesis BP
GO:0010089 xylem development BP
GO:0010487 thermospermine synthase activity MF
GO:0010817 regulation of hormone levels BP
GO:0016740 transferase activity MF
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups MF
GO:0016768 spermine synthase activity MF
GO:0030154 cell differentiation BP
GO:0032502 developmental process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048759 xylem vessel member cell differentiation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0060918 auxin transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:1905177 tracheary element differentiation BP