Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
GSVIVG01036477001.Genoscope12X.g
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Position
chr14:22547145-22550191 (-)
3046bp
Gene Type
gene
Gene Description (Protein Product)
tryptophan synthase beta chain
Organism
Vitis vinifera
Also AS AT5G38530Vitvi14g01281

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
GSVIVG01037237001.Genoscope12X.g aminotransferase
GSVIVG01037672001.Genoscope12X.g Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione
GSVIVG01037671001.Genoscope12X.g Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione
Regulatory gene
GSVIVG01000386001.Genoscope12X.g Zinc-finger homeodomain protein
GSVIVG01000620001.Genoscope12X.g Dehydration-responsive element-binding protein
GSVIVG01000802001.Genoscope12X.g Floral homeotic protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].