Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
GSVIVG01036703001.Genoscope12X.g
View in Genome Browser
Position
chr19:23555077-23625967 (+)
70890bp
Gene Type
gene
Gene Description (Protein Product)
Protein strawberry notch
Organism
Vitis vinifera
Also AS AT1G79350Vitvi19g01756

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
GSVIVG01037731001.Genoscope12X.g Phd finger protein
GSVIVG01037732001.Genoscope12X.g Phd finger protein
GSVIVG01037749001.Genoscope12X.g metal ion binding
Regulatory gene
GSVIVG01000318001.Genoscope12X.g histone deacetylase
GSVIVG01002242001.Genoscope12X.g dof zinc finger protein
GSVIVG01003119001.Genoscope12X.g ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002009 morphogenesis of an epithelium BP
GO:0002165 instar larval or pupal development BP
GO:0003002 regionalization BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003682 chromatin binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006323 chromosome organization BP
GO:0006325 chromatin organization BP
GO:0006333 chromatin organization BP
GO:0006334 nucleosome assembly BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006950 response to stress BP
GO:0006996 organelle organization BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007166 cell surface receptor signaling pathway BP
GO:0007219 Notch signaling pathway BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0007444 imaginal disc development BP
GO:0007447 imaginal disc pattern formation BP
GO:0007450 dorsal/ventral pattern formation, imaginal disc BP
GO:0007472 wing disc morphogenesis BP
GO:0007476 imaginal disc-derived wing morphogenesis BP
GO:0007552 metamorphosis BP
GO:0007560 imaginal disc morphogenesis BP
GO:0008150 biological_process BP
GO:0008587 imaginal disc-derived wing margin morphogenesis BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009886 post-embryonic animal morphogenesis BP
GO:0009887 animal organ morphogenesis BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009953 dorsal/ventral pattern formation BP
GO:0009987 cellular process BP
GO:0010286 heat acclimation BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0016043 cellular component organization BP
GO:0016584 obsolete nucleosome positioning BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022607 cellular component assembly BP
GO:0023052 signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031490 chromatin DNA binding MF
GO:0031497 chromatin organization BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034622 protein-containing complex assembly BP
GO:0034728 nucleosome organization BP
GO:0035107 appendage morphogenesis BP
GO:0035114 imaginal disc-derived appendage morphogenesis BP
GO:0035120 post-embryonic appendage morphogenesis BP
GO:0035220 wing disc development BP
GO:0035222 wing disc pattern formation BP
GO:0035239 tube morphogenesis BP
GO:0035295 tube development BP
GO:0040029 epigenetic regulation of gene expression BP
GO:0042393 histone binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0045944 positive regulation of transcription by RNA polymerase II BP
GO:0048190 wing disc dorsal/ventral pattern formation BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048563 post-embryonic animal organ morphogenesis BP
GO:0048569 post-embryonic animal organ development BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048707 instar larval or pupal morphogenesis BP
GO:0048729 tissue morphogenesis BP
GO:0048731 system development BP
GO:0048736 appendage development BP
GO:0048737 imaginal disc-derived appendage development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0051276 chromosome organization BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060429 epithelium development BP
GO:0060562 epithelial tube morphogenesis BP
GO:0065003 protein-containing complex assembly BP
GO:0065004 protein-DNA complex assembly BP
GO:0065007 biological regulation BP
GO:0071103 DNA conformation change BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP
GO:0097159 organic cyclic compound binding MF
GO:1900034 regulation of cellular response to heat BP
GO:1900036 positive regulation of cellular response to heat BP
GO:1901363 heterocyclic compound binding MF
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:1990841 promoter-specific chromatin binding MF
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP