Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
GSVIVG01037634001.Genoscope12X.g
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Position
chr19:6413980-6416816 (+)
2836bp
Gene Type
gene
Gene Description (Protein Product)
polyadenylate-binding protein
Organism
Vitis vinifera
Also AS AT1G11650Vitvi19g00486

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
GSVIVG01038636001.Genoscope12X.g Serine arginine-rich splicing factor
GSVIVG01038169001.Genoscope12X.g Belongs to the DEAD box helicase family
GSVIVG01038734001.Genoscope12X.g serine arginine-rich splicing factor
Regulatory gene
GSVIVG01000606001.Genoscope12X.g MYB family transcription factor
GSVIVG01000802001.Genoscope12X.g Floral homeotic protein
GSVIVG01001374001.Genoscope12X.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003727 single-stranded RNA binding MF
GO:0003729 mRNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0008143 poly(A) binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0070717 poly-purine tract binding MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF