Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107412613
View in Genome Browser
Position
NC_063288.1:26481078-26489037 (+)
7959bp
Gene Type
gene
Gene Description (Protein Product)
Xanthine dehydrogenase
Organism
Ziziphus jujuba
Also AS AT4G34890

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107413131 Catalyzes the oxidation of uric acid to 5- hydroxyisourate; which is further processed to form (S)-allantoin
gene-LOC107432382 Belongs to the purine pyrimidine phosphoribosyltransferase family
gene-LOC107434825 -
Regulatory gene
gene-LOC107404161 Zinc finger protein
gene-LOC107404450 B3 DNA binding domain
gene-LOC107405017 B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004854 xanthine dehydrogenase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006144 purine nucleobase metabolic process BP
GO:0006145 purine nucleobase catabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006801 superoxide metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009112 nucleobase metabolic process BP
GO:0009115 xanthine catabolic process BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0016491 oxidoreductase activity MF
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups MF
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor MF
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors MF
GO:0019439 aromatic compound catabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0036094 small molecule binding MF
GO:0042221 response to chemical BP
GO:0042554 superoxide anion generation BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043546 molybdopterin cofactor binding MF
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046110 xanthine metabolic process BP
GO:0046113 nucleobase catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0050660 flavin adenine dinucleotide binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0051536 iron-sulfur cluster binding MF
GO:0051537 2 iron, 2 sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:0072521 purine-containing compound metabolic process BP
GO:0072523 purine-containing compound catabolic process BP
GO:0072593 reactive oxygen species metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:1901265 nucleoside phosphate binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00232 Caffeine metabolism -
map00230 Purine metabolism -