Basic Information
Gene ID
gene-LOC107420849
Position
NC_063292.1:9195983-9201556 (-)
5573bp
Gene Type
gene
Gene Description (Protein Product)
Blue/Ultraviolet sensing protein C terminal
Organism
Also AS AT4G08920

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107426639 Adagio protein
gene-LOC107422878 FAD binding domain of DNA photolyase
Regulatory gene
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein
gene-LOC107405758 Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0000302 response to reactive oxygen species BP
GO:0000304 response to singlet oxygen BP
GO:0001101 response to acid chemical BP
GO:0001558 regulation of cell growth BP
GO:0002682 regulation of immune system process BP
GO:0002684 positive regulation of immune system process BP
GO:0002831 regulation of response to biotic stimulus BP
GO:0002833 positive regulation of response to biotic stimulus BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004672 protein kinase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006732 obsolete coenzyme metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006874 intracellular calcium ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0007584 response to nutrient BP
GO:0007623 circadian rhythm BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0009117 nucleotide metabolic process BP
GO:0009314 response to radiation BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009416 response to light stimulus BP
GO:0009581 detection of external stimulus BP
GO:0009582 detection of abiotic stimulus BP
GO:0009583 detection of light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009638 phototropism BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009642 response to light intensity BP
GO:0009644 response to high light intensity BP
GO:0009645 response to low light intensity stimulus BP
GO:0009646 response to absence of light BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009785 blue light signaling pathway BP
GO:0009791 post-embryonic development BP
GO:0009812 flavonoid metabolic process BP
GO:0009881 photoreceptor activity MF
GO:0009882 blue light photoreceptor activity MF
GO:0009888 tissue development BP
GO:0009914 hormone transport BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010073 meristem maintenance BP
GO:0010075 regulation of meristem growth BP
GO:0010112 regulation of systemic acquired resistance BP
GO:0010114 response to red light BP
GO:0010117 photoprotection BP
GO:0010118 stomatal movement BP
GO:0010218 response to far red light BP
GO:0010244 response to low fluence blue light stimulus by blue low-fluence system BP
GO:0010310 regulation of hydrogen peroxide metabolic process BP
GO:0010343 singlet oxygen-mediated programmed cell death BP
GO:0010359 regulation of anion channel activity BP
GO:0010617 circadian regulation of calcium ion oscillation BP
GO:0010817 regulation of hormone levels BP
GO:0012501 programmed cell death BP
GO:0014070 response to organic cyclic compound BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016604 nuclear body CC
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0017076 purine nucleotide binding MF
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019725 cellular homeostasis BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0022898 regulation of transmembrane transporter activity BP
GO:0023052 signaling BP
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0030522 intracellular receptor signaling pathway BP
GO:0030554 adenyl nucleotide binding MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031347 regulation of defense response BP
GO:0031349 positive regulation of defense response BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0031670 cellular response to nutrient BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032101 regulation of response to external stimulus BP
GO:0032103 positive regulation of response to external stimulus BP
GO:0032409 regulation of transporter activity BP
GO:0032411 positive regulation of transporter activity BP
GO:0032412 regulation of monoatomic ion transmembrane transporter activity BP
GO:0032414 positive regulation of ion transmembrane transporter activity BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032879 regulation of localization BP
GO:0033554 cellular response to stress BP
GO:0033993 response to lipid BP
GO:0034599 cellular response to oxidative stress BP
GO:0034614 cellular response to reactive oxygen species BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034762 regulation of transmembrane transport BP
GO:0034764 positive regulation of transmembrane transport BP
GO:0034765 regulation of monoatomic ion transmembrane transport BP
GO:0034767 positive regulation of monoatomic ion transmembrane transport BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0036094 small molecule binding MF
GO:0036211 protein modification process BP
GO:0036473 cell death in response to oxidative stress BP
GO:0038023 signaling receptor activity MF
GO:0040008 regulation of growth BP
GO:0042221 response to chemical BP
GO:0042440 pigment metabolic process BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042592 homeostatic process BP
GO:0042726 flavin-containing compound metabolic process BP
GO:0042752 regulation of circadian rhythm BP
GO:0042802 identical protein binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043269 regulation of monoatomic ion transport BP
GO:0043270 positive regulation of monoatomic ion transport BP
GO:0043412 macromolecule modification BP
GO:0043900 obsolete regulation of multi-organism process BP
GO:0043902 obsolete positive regulation of multi-organism process BP
GO:0044070 regulation of monoatomic anion transport BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0045088 regulation of innate immune response BP
GO:0045089 positive regulation of innate immune response BP
GO:0046283 anthocyanin-containing compound metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046777 protein autophosphorylation BP
GO:0048037 obsolete cofactor binding MF
GO:0048507 meristem development BP
GO:0048509 regulation of meristem development BP
GO:0048511 rhythmic process BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048638 regulation of developmental growth BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0048878 chemical homeostasis BP
GO:0050660 flavin adenine dinucleotide binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050776 regulation of immune response BP
GO:0050778 positive regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051050 positive regulation of transport BP
GO:0051093 negative regulation of developmental process BP
GO:0051128 regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051193 obsolete regulation of cofactor metabolic process BP
GO:0051234 establishment of localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051480 regulation of cytosolic calcium ion concentration BP
GO:0051510 regulation of unidimensional cell growth BP
GO:0051606 detection of stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055074 calcium ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0060089 molecular transducer activity MF
GO:0060918 auxin transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070887 cellular response to chemical stimulus BP
GO:0071000 response to magnetism BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071452 cellular response to singlet oxygen BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071483 cellular response to blue light BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071949 FAD binding MF
GO:0072387 flavin adenine dinucleotide metabolic process BP
GO:0072503 obsolete cellular divalent inorganic cation homeostasis BP
GO:0072507 obsolete divalent inorganic cation homeostasis BP
GO:0080134 regulation of response to stress BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0097468 programmed cell death in response to reactive oxygen species BP
GO:0098771 inorganic ion homeostasis BP
GO:0099402 plant organ development BP
GO:0104004 cellular response to environmental stimulus BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1900424 regulation of defense response to bacterium BP
GO:1900426 positive regulation of defense response to bacterium BP
GO:1900618 regulation of shoot system morphogenesis BP
GO:1901265 nucleoside phosphate binding MF
GO:1901332 negative regulation of lateral root development BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901371 regulation of leaf morphogenesis BP
GO:1901529 positive regulation of anion channel activity BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901672 positive regulation of systemic acquired resistance BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902347 response to strigolactone BP
GO:1902446 regulation of shade avoidance BP
GO:1902448 positive regulation of shade avoidance BP
GO:1903793 positive regulation of monoatomic anion transport BP
GO:1903959 regulation of monoatomic anion transmembrane transport BP
GO:1903961 positive regulation of anion transmembrane transport BP
GO:1905421 regulation of plant organ morphogenesis BP
GO:2000023 regulation of lateral root development BP
GO:2000024 regulation of leaf development BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000030 regulation of response to red or far red light BP
GO:2000069 regulation of post-embryonic root development BP
GO:2000280 regulation of root development BP
GO:2000377 regulation of reactive oxygen species metabolic process BP
KEGG Term Name Description
map04712 Circadian rhythm - plant -