Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107424388
View in Genome Browser
Position
NC_063294.1:9005474-9010145 (-)
4671bp
Gene Type
gene
Gene Description (Protein Product)
NAC domain-containing protein
Organism
Ziziphus jujuba
Also AS AT2G18060

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107435239 NAC transcription factor
gene-LOC107430472 NAC domain-containing protein
gene-LOC107434917 ODORANT1-like
Regulatory gene
gene-LOC107403286 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
gene-LOC107403527 transcription factor
gene-LOC107403729 Myb-related protein
Target gene
gene-LOC107403244 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1;5-bisphosphate; the primary event in carbon dioxide fixation; as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site
gene-LOC107403316 serine acetyltransferase
gene-LOC107403340 Domain of unknown function (DUF4220)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009611 response to wounding BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010087 phloem or xylem histogenesis BP
GO:0010089 xylem development BP
GO:0010200 response to chitin BP
GO:0010243 response to organonitrogen compound BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0030154 cell differentiation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042060 wound healing BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044087 regulation of cellular component biogenesis BP
GO:0044089 positive regulation of cellular component biogenesis BP
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048759 xylem vessel member cell differentiation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0140110 transcription regulator activity MF
GO:1901348 positive regulation of secondary cell wall biogenesis BP
GO:1901363 heterocyclic compound binding MF
GO:1901698 response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP
GO:1903338 regulation of cell wall organization or biogenesis BP
GO:1903340 positive regulation of cell wall organization or biogenesis BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905177 tracheary element differentiation BP
GO:1990110 callus formation BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000652 regulation of secondary cell wall biogenesis BP
GO:2001141 regulation of RNA biosynthetic process BP