PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107424883 View in Genome Browser
Position	NC_063294.1:11661677-11663559 (+) 1882bp
Gene Type	gene
Gene Description (Protein Product)	Alcohol dehydrogenase GroES-like domain
Organism	Ziziphus jujuba
Also AS	AT3G19450

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107434142 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

gene-LOC107430451 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

gene-LOC107433375 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols; respectively (By similarity). Seems to contribute to the inhibition of germination during stress

Regulatory gene

gene-LOC107403266 AP2-like ethylene-responsive transcription factor

gene-LOC107403899 dof zinc finger protein

gene-LOC107404240 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.