Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107425387
View in Genome Browser
Position
NC_063294.1:16826528-16838057 (-)
11529bp
Gene Type
gene
Gene Description (Protein Product)
Protein kinase C conserved region 2 (CalB)
Organism
Ziziphus jujuba
Also AS AT2G22125

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107425511 Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily
gene-LOC107432703 Tubulin is the major constituent of microtubules. It binds two moles of GTP; one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
gene-LOC107426543 Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily
Regulatory gene
gene-LOC107405089 Protein BASIC PENTACYSTEINE2-like
gene-LOC107420393 Protein BASIC PENTACYSTEINE6-like
gene-LOC107426555 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000271 polysaccharide biosynthetic process BP
GO:0000278 mitotic cell cycle BP
GO:0000281 mitotic cytokinesis BP
GO:0000910 cytokinesis BP
GO:0001101 response to acid chemical BP
GO:0002682 regulation of immune system process BP
GO:0002683 negative regulation of immune system process BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005102 signaling receptor binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005829 cytosol CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005881 cytoplasmic microtubule CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0005938 cell cortex CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0006073 cellular glucan metabolic process BP
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007049 cell cycle BP
GO:0007275 multicellular organism development BP
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009250 glucan biosynthetic process BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009506 plasmodesma CC
GO:0009555 pollen development BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009664 plant-type cell wall organization BP
GO:0009791 post-embryonic development BP
GO:0009832 plant-type cell wall biogenesis BP
GO:0009833 plant-type primary cell wall biogenesis BP
GO:0009856 pollination BP
GO:0009898 cytoplasmic side of plasma membrane CC
GO:0009900 dehiscence BP
GO:0009901 anther dehiscence BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010208 pollen wall assembly BP
GO:0010215 cellulose microfibril organization BP
GO:0010330 cellulose synthase complex CC
GO:0010927 cellular component assembly involved in morphogenesis BP
GO:0010941 regulation of cell death BP
GO:0012505 endomembrane system CC
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0016051 carbohydrate biosynthetic process BP
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022607 cellular component assembly BP
GO:0030054 cell junction CC
GO:0030198 extracellular matrix organization BP
GO:0030243 cellulose metabolic process BP
GO:0030244 cellulose biosynthetic process BP
GO:0030863 cortical cytoskeleton CC
GO:0030865 cortical cytoskeleton organization BP
GO:0030981 cortical microtubule cytoskeleton CC
GO:0031122 cytoplasmic microtubule organization BP
GO:0032446 protein modification by small protein conjugation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032886 regulation of microtubule-based process BP
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033043 regulation of organelle organization BP
GO:0033365 protein localization to organelle BP
GO:0033612 receptor serine/threonine kinase binding MF
GO:0033692 cellular polysaccharide biosynthetic process BP
GO:0034613 protein localization BP
GO:0034637 cellular carbohydrate biosynthetic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0036211 protein modification process BP
GO:0036449 microtubule minus-end CC
GO:0040007 growth BP
GO:0042221 response to chemical BP
GO:0042546 cell wall biogenesis BP
GO:0042742 defense response to bacterium BP
GO:0042981 regulation of apoptotic process BP
GO:0043062 extracellular structure organization BP
GO:0043066 negative regulation of apoptotic process BP
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043622 cortical microtubule organization BP
GO:0044042 glucan metabolic process BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044264 cellular polysaccharide metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044380 protein localization to cytoskeleton BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0044706 multi-multicellular organism process BP
GO:0045229 external encapsulating structure organization BP
GO:0048229 gametophyte development BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048443 stamen development BP
GO:0048466 androecium development BP
GO:0048467 gynoecium development BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048653 anther development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0048868 pollen tube development BP
GO:0048869 cellular developmental process BP
GO:0050776 regulation of immune response BP
GO:0050777 negative regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051211 anisotropic cell growth BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051273 beta-glucan metabolic process BP
GO:0051274 beta-glucan biosynthetic process BP
GO:0051301 cell division BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051592 response to calcium ion BP
GO:0051641 cellular localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055028 cortical microtubule CC
GO:0055044 symplast CC
GO:0060548 negative regulation of cell death BP
GO:0061458 reproductive system development BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0065007 biological regulation BP
GO:0070507 regulation of microtubule cytoskeleton organization BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070696 transmembrane receptor protein serine/threonine kinase binding MF
GO:0070726 cell wall assembly BP
GO:0070727 cellular macromolecule localization BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071668 plant-type cell wall assembly BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072697 protein localization to cell cortex BP
GO:0072698 protein localization to microtubule cytoskeleton BP
GO:0072699 protein localization to cortical microtubule cytoskeleton BP
GO:0085029 extracellular matrix assembly BP
GO:0090567 reproductive shoot system development BP
GO:0097435 supramolecular fiber organization BP
GO:0098542 defense response to other organism BP
GO:0098552 side of membrane CC
GO:0098562 cytoplasmic side of membrane CC
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099402 plant organ development BP
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099568 cytoplasmic region CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1902494 catalytic complex CC
GO:1903047 mitotic cell cycle process BP
GO:1905421 regulation of plant organ morphogenesis BP
GO:1990234 transferase complex CC
GO:1990752 microtubule end CC
GO:1990778 protein localization to cell periphery BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000028 regulation of photoperiodism, flowering BP
GO:2000067 regulation of root morphogenesis BP
GO:2000241 regulation of reproductive process BP
GO:2000280 regulation of root development BP