PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107425674 View in Genome Browser
Position	NC_063294.1:24621358-24622401 (+) 1043bp
Gene Type	gene
Gene Description (Protein Product)	Photosystem I reaction center subunit N
Organism	Ziziphus jujuba
Also AS	AT5G64040

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107426460 Photosystem I reaction center subunit IV

gene-LOC125420346 PsaA and PsaB bind P700; the primary electron donor of photosystem I (PSI); as well as the electron acceptors A0; A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase; converting photonic excitation into a charge separation; which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0; A1; FX; FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin

gene-LOC125419930 NAD(P)H-quinone oxidoreductase chain 4

Regulatory gene

gene-LOC107403899 dof zinc finger protein

gene-LOC107404240 Dof zinc finger protein

gene-LOC107405089 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0019904	protein domain specific binding	MF

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00195	Photosynthesis	Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.