PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107425854 View in Genome Browser
Position	NC_063295.1:3831263-3834104 (-) 2841bp
Gene Type	gene
Gene Description (Protein Product)	Beta-carotene isomerase D27
Organism	Ziziphus jujuba
Also AS	AT1G03055

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107433792 Lycopene beta cyclase

gene-LOC107434703 Belongs to the calycin superfamily. Lipocalin family

gene-LOC107427027 Belongs to the UDP-glycosyltransferase family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001763	morphogenesis of a branching structure	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005506	iron ion binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006629	lipid metabolic process	BP
GO:0006714	sesquiterpenoid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0006721	terpenoid metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009653	anatomical structure morphogenesis	BP
GO:0009987	cellular process	BP
GO:0010016	shoot system morphogenesis	BP
GO:0010223	secondary shoot formation	BP
GO:0010346	shoot axis formation	BP
GO:0010817	regulation of hormone levels	BP
GO:0016106	sesquiterpenoid biosynthetic process	BP
GO:0016114	terpenoid biosynthetic process	BP
GO:0016853	isomerase activity	MF
GO:0016859	cis-trans isomerase activity	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0042445	hormone metabolic process	BP
GO:0042446	hormone biosynthetic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0048367	shoot system development	BP
GO:0048646	anatomical structure formation involved in morphogenesis	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071704	organic substance metabolic process	BP
GO:1901334	lactone metabolic process	BP
GO:1901336	lactone biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901600	strigolactone metabolic process	BP
GO:1901601	strigolactone biosynthetic process	BP
GO:1905393	plant organ formation	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map00906	Carotenoid biosynthesis	-