Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107426698
View in Genome Browser
Position
NC_063295.1:8549084-8558414 (+)
9330bp
Gene Type
gene
Gene Description (Protein Product)
Essential component of the vacuolar proton pump (V- ATPase); a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase
Organism
Ziziphus jujuba
Also AS AT4G39080

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125418750 V-type proton ATPase catalytic subunit
gene-LOC107428241 V-type proton ATPase catalytic subunit
gene-LOC107426734 Soluble inorganic pyrophosphatase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000323 lytic vacuole CC
GO:0000325 plant-type vacuole CC
GO:0000331 contractile vacuole CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005765 lysosomal membrane CC
GO:0005768 endosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005886 plasma membrane CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006163 purine nucleotide metabolic process BP
GO:0006164 purine nucleotide biosynthetic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006754 ATP biosynthetic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0006882 intracellular zinc ion homeostasis BP
GO:0006885 regulation of pH BP
GO:0006897 endocytosis BP
GO:0006909 phagocytosis BP
GO:0006911 phagocytosis, engulfment BP
GO:0007035 vacuolar acidification BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009058 biosynthetic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009123 nucleoside monophosphate metabolic process BP
GO:0009124 nucleoside monophosphate biosynthetic process BP
GO:0009126 purine nucleoside monophosphate metabolic process BP
GO:0009127 purine nucleoside monophosphate biosynthetic process BP
GO:0009141 nucleoside triphosphate metabolic process BP
GO:0009142 nucleoside triphosphate biosynthetic process BP
GO:0009144 purine nucleoside triphosphate metabolic process BP
GO:0009145 purine nucleoside triphosphate biosynthetic process BP
GO:0009150 purine ribonucleotide metabolic process BP
GO:0009152 purine ribonucleotide biosynthetic process BP
GO:0009156 ribonucleoside monophosphate biosynthetic process BP
GO:0009161 ribonucleoside monophosphate metabolic process BP
GO:0009165 nucleotide biosynthetic process BP
GO:0009167 purine ribonucleoside monophosphate metabolic process BP
GO:0009168 purine ribonucleoside monophosphate biosynthetic process BP
GO:0009199 ribonucleoside triphosphate metabolic process BP
GO:0009201 ribonucleoside triphosphate biosynthetic process BP
GO:0009205 purine ribonucleoside triphosphate metabolic process BP
GO:0009206 purine ribonucleoside triphosphate biosynthetic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009260 ribonucleotide biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity MF
GO:0009705 plant-type vacuole membrane CC
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0010324 membrane invagination BP
GO:0012505 endomembrane system CC
GO:0012506 vesicle membrane CC
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015077 inorganic cation transmembrane transporter activity MF
GO:0015078 proton transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015672 inorganic cation transmembrane transport BP
GO:0015985 energy coupled proton transport, down electrochemical gradient BP
GO:0015986 proton motive force-driven ATP synthesis BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016462 pyrophosphatase activity MF
GO:0016469 proton-transporting two-sector ATPase complex CC
GO:0016471 vacuolar proton-transporting V-type ATPase complex CC
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0019725 cellular homeostasis BP
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity MF
GO:0019899 enzyme binding MF
GO:0022607 cellular component assembly BP
GO:0022804 active transmembrane transporter activity MF
GO:0022853 active monoatomic ion transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0030004 obsolete cellular monovalent inorganic cation homeostasis BP
GO:0030139 endocytic vesicle CC
GO:0030641 regulation of cellular pH BP
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030666 endocytic vesicle membrane CC
GO:0030670 phagocytic vesicle membrane CC
GO:0031090 organelle membrane CC
GO:0031164 contractile vacuolar membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0031982 vesicle CC
GO:0032009 early phagosome CC
GO:0032119 sequestering of zinc ion BP
GO:0032991 protein-containing complex CC
GO:0033176 proton-transporting V-type ATPase complex CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0034622 protein-containing complex assembly BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0036442 P-type proton-exporting transporter activity MF
GO:0042592 homeostatic process BP
GO:0042623 ATP hydrolysis activity MF
GO:0042625 ATPase-coupled ion transmembrane transporter activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0043181 vacuolar sequestering BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044437 obsolete vacuolar part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism MF
GO:0045335 phagocytic vesicle CC
GO:0045735 nutrient reservoir activity MF
GO:0045851 pH reduction BP
GO:0046034 ATP metabolic process BP
GO:0046390 ribose phosphate biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046916 obsolete intracellular transition metal ion homeostasis BP
GO:0046961 proton-transporting ATPase activity, rotational mechanism MF
GO:0048878 chemical homeostasis BP
GO:0050801 monoatomic ion homeostasis BP
GO:0051117 ATPase binding MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051235 maintenance of location BP
GO:0051238 sequestering of metal ion BP
GO:0051452 intracellular pH reduction BP
GO:0051453 regulation of intracellular pH BP
GO:0051641 cellular localization BP
GO:0051651 maintenance of location in cell BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055067 obsolete monovalent inorganic cation homeostasis BP
GO:0055069 obsolete zinc ion homeostasis BP
GO:0055076 obsolete transition metal ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055085 transmembrane transport BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0061024 membrane organization BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070070 proton-transporting V-type ATPase complex assembly BP
GO:0070071 proton-transporting two-sector ATPase complex assembly BP
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072503 obsolete cellular divalent inorganic cation homeostasis BP
GO:0072507 obsolete divalent inorganic cation homeostasis BP
GO:0072521 purine-containing compound metabolic process BP
GO:0072522 purine-containing compound biosynthetic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:0090662 transmembrane transport BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098657 import into cell BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0098771 inorganic ion homeostasis BP
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0098852 lytic vacuole membrane CC
GO:0099024 plasma membrane invagination BP
GO:0099131 monoatomic ion transmembrane transport BP
GO:0099132 monoatomic cation transmembrane transport BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901293 nucleoside phosphate biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1902600 proton transmembrane transport BP
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map01100 Metabolic pathways -
map00190 Oxidative phosphorylation -