Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107427965
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Position
NC_063295.1:28747447-28752017 (+)
4570bp
Gene Type
gene
Gene Description (Protein Product)
Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells
Organism
Ziziphus jujuba
Also AS AT1G12840

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107435487 Essential component of the vacuolar proton pump (V- ATPase); a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase
gene-LOC107428241 V-type proton ATPase catalytic subunit
gene-LOC107433106 V-type proton ATPase subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain CC
GO:0000325 plant-type vacuole CC
GO:0000902 cell morphogenesis BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0008553 P-type proton-exporting transporter activity MF
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009653 anatomical structure morphogenesis BP
GO:0009826 unidimensional cell growth BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015077 inorganic cation transmembrane transporter activity MF
GO:0015078 proton transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015662 P-type ion transporter activity MF
GO:0015672 inorganic cation transmembrane transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0016462 pyrophosphatase activity MF
GO:0016469 proton-transporting two-sector ATPase complex CC
GO:0016471 vacuolar proton-transporting V-type ATPase complex CC
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity MF
GO:0022804 active transmembrane transporter activity MF
GO:0022853 active monoatomic ion transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0031090 organelle membrane CC
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0033176 proton-transporting V-type ATPase complex CC
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain CC
GO:0033180 proton-transporting V-type ATPase, V1 domain CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0036442 P-type proton-exporting transporter activity MF
GO:0040007 growth BP
GO:0042623 ATP hydrolysis activity MF
GO:0042625 ATPase-coupled ion transmembrane transporter activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048589 developmental growth BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090662 transmembrane transport BP
GO:0098588 bounding membrane of organelle CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0099131 monoatomic ion transmembrane transport BP
GO:0099132 monoatomic cation transmembrane transport BP
GO:1902600 proton transmembrane transport BP
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map01100 Metabolic pathways -
map00190 Oxidative phosphorylation -