PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107428101 View in Genome Browser
Position	NC_063296.1:938050-949997 (+) 11947bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the terpene cyclase mutase family
Organism	Ziziphus jujuba
Also AS	AT1G78955

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125418608 Delta(24)-sterol

gene-LOC107430182 2-C-methyl-D-erythritol 2;4-cyclodiphosphate synthase

gene-LOC107432630 Belongs to the HisA HisF family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0006629	lipid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0006721	terpenoid metabolic process	BP
GO:0006722	triterpenoid metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016104	triterpenoid biosynthetic process	BP
GO:0016114	terpenoid biosynthetic process	BP
GO:0016853	isomerase activity	MF
GO:0016866	intramolecular transferase activity	MF
GO:0019742	pentacyclic triterpenoid metabolic process	BP
GO:0019745	pentacyclic triterpenoid biosynthetic process	BP
GO:0031559	oxidosqualene cyclase activity	MF
GO:0042300	beta-amyrin synthase activity	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01110	Biosynthesis of secondary metabolites	-
map01110	Biosynthesis of secondary metabolites	-
map00909	Sesquiterpenoid biosynthesis	Sesquiterpenoids (C15 terpenoids) are a group of terpenoids consisting of three isoprene units. They are derive from farnesyl diphosphate (FPP) and can be cyclized to produce various skeletal structures. Sesquiterpenoid biosynthesis begins with the loss of diphosphate from FPP under the action of sesquiterpene synthesis enzymes, generating an allylic cation that is highly susceptible to intramolecular attacks. Cyclization of the farnesyl cation may take place onto either of the remaining double bonds with the result that 6-, 10-, or 11-membered rings may be formed. Many sesquiterpenoids have been isolated from plants, fungi, marine organisms, and Streptomyces species. This map shows a few examples of acyclic and cyclic sesquiterpenoids.
map00909	Sesquiterpenoid biosynthesis	Sesquiterpenoids (C15 terpenoids) are a group of terpenoids consisting of three isoprene units. They are derive from farnesyl diphosphate (FPP) and can be cyclized to produce various skeletal structures. Sesquiterpenoid biosynthesis begins with the loss of diphosphate from FPP under the action of sesquiterpene synthesis enzymes, generating an allylic cation that is highly susceptible to intramolecular attacks. Cyclization of the farnesyl cation may take place onto either of the remaining double bonds with the result that 6-, 10-, or 11-membered rings may be formed. Many sesquiterpenoids have been isolated from plants, fungi, marine organisms, and Streptomyces species. This map shows a few examples of acyclic and cyclic sesquiterpenoids.
map00909	Sesquiterpenoid biosynthesis	Sesquiterpenoids (C15 terpenoids) are a group of terpenoids consisting of three isoprene units. They are derive from farnesyl diphosphate (FPP) and can be cyclized to produce various skeletal structures. Sesquiterpenoid biosynthesis begins with the loss of diphosphate from FPP under the action of sesquiterpene synthesis enzymes, generating an allylic cation that is highly susceptible to intramolecular attacks. Cyclization of the farnesyl cation may take place onto either of the remaining double bonds with the result that 6-, 10-, or 11-membered rings may be formed. Many sesquiterpenoids have been isolated from plants, fungi, marine organisms, and Streptomyces species. This map shows a few examples of acyclic and cyclic sesquiterpenoids.