PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107428314 View in Genome Browser
Position	NC_063296.1:4225218-4230128 (-) 4910bp
Gene Type	gene
Gene Description (Protein Product)	Zinc finger protein
Organism	Ziziphus jujuba
Also AS	AT2G02080AT2G02070

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107431223 Belongs to the GRAS family

gene-LOC125419896 Belongs to the GRAS family

gene-LOC107428703 Retinoblastoma-related

Target gene

gene-LOC107403244 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1;5-bisphosphate; the primary event in carbon dioxide fixation; as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site

gene-LOC107403286 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains

gene-LOC107403295 auxin-binding protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0006355	regulation of DNA-templated transcription	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008356	asymmetric cell division	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0022622	root system development	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0048364	root development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051301	cell division	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0099402	plant organ development	BP
GO:0140110	transcription regulator activity	MF
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP