Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107429035
View in Genome Browser
Position
NC_063292.1:28592211-28595710 (+)
3499bp
Gene Type
gene
Gene Description (Protein Product)
Plant nuclear matrix protein 1 (NMP1)
Organism
Ziziphus jujuba
Also AS AT5G17620

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107432944 HAUS augmin-like complex subunit 4
gene-LOC107433368 Methyltransferase-like protein
gene-LOC107432394 Belongs to the AAA ATPase family
Regulatory gene
gene-LOC107405089 Protein BASIC PENTACYSTEINE2-like
gene-LOC107420393 Protein BASIC PENTACYSTEINE6-like
gene-LOC107426555 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005876 spindle microtubule CC
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0009524 phragmoplast CC
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0051011 microtubule minus-end binding MF
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC