PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107429478 View in Genome Browser
Position	NC_063296.1:23091536-23093319 (-) 1783bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the terpene synthase family
Organism	Ziziphus jujuba
Also AS	AT4G02780

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107432883 Belongs to the FPP GGPP synthase family

gene-LOC107430862 Acyl-coenzyme A oxidase 4

gene-LOC107429538 Belongs to the iron ascorbate-dependent oxidoreductase family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000287	magnesium ion binding	MF
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006082	organic acid metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0006721	terpenoid metabolic process	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009685	gibberellin metabolic process	BP
GO:0009686	gibberellin biosynthetic process	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009739	response to gibberellin	BP
GO:0009740	gibberellic acid mediated signaling pathway	BP
GO:0009755	hormone-mediated signaling pathway	BP
GO:0009905	ent-copalyl diphosphate synthase activity	MF
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010476	gibberellin mediated signaling pathway	BP
GO:0010817	regulation of hormone levels	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016101	diterpenoid metabolic process	BP
GO:0016102	diterpenoid biosynthetic process	BP
GO:0016114	terpenoid biosynthetic process	BP
GO:0016853	isomerase activity	MF
GO:0016872	intramolecular lyase activity	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0023052	signaling	BP
GO:0032870	cellular response to hormone stimulus	BP
GO:0033993	response to lipid	BP
GO:0042221	response to chemical	BP
GO:0042445	hormone metabolic process	BP
GO:0042446	hormone biosynthetic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046872	metal ion binding	MF
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071229	cellular response to acid chemical	BP
GO:0071310	cellular response to organic substance	BP
GO:0071370	cellular response to gibberellin stimulus	BP
GO:0071396	cellular response to lipid	BP
GO:0071495	cellular response to endogenous stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1901701	cellular response to oxygen-containing compound	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00904	Diterpenoid biosynthesis	-
map00904	Diterpenoid biosynthesis	-