Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107430267
View in Genome Browser
Position
NC_063287.1:36143922-36148968 (-)
5046bp
Gene Type
gene
Gene Description (Protein Product)
Cytochrome c-type biogenesis ccda-like chloroplastic protein
Organism
Ziziphus jujuba
Also AS AT5G54290

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107433562 Copper chaperone for superoxide
gene-LOC125418189 Cytochrome C and Quinol oxidase polypeptide I
gene-LOC125419787 cytochrome c oxidase subunit 3
Regulatory gene
gene-LOC107403266 AP2-like ethylene-responsive transcription factor
gene-LOC107404161 Zinc finger protein
gene-LOC107405043 Zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009987 cellular process BP
GO:0010190 cytochrome b6f complex assembly BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0017004 cytochrome complex assembly BP
GO:0022607 cellular component assembly BP
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0034357 photosynthetic membrane CC
GO:0034622 protein-containing complex assembly BP
GO:0042651 thylakoid membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0055035 plastid thylakoid membrane CC
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP