Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107430502
View in Genome Browser
Position
NC_063287.1:36350618-36360423 (-)
9805bp
Gene Type
gene
Gene Description (Protein Product)
Ubiquitin carboxyl-terminal hydrolase
Organism
Ziziphus jujuba
Also AS AT3G20630

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107430529 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC107432081 ubiquitin-60S ribosomal protein
gene-LOC107431070 Ubiquitin-activating enzyme E1
Regulatory gene
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein
gene-LOC107405930 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004843 cysteine-type deubiquitinase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0010154 fruit development BP
GO:0016049 cell growth BP
GO:0016579 protein deubiquitination BP
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0019783 ubiquitin-like protein peptidase activity MF
GO:0021700 developmental maturation BP
GO:0022414 reproductive process BP
GO:0022622 root system development BP
GO:0030154 cell differentiation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0036211 protein modification process BP
GO:0036459 cysteine-type deubiquitinase activity MF
GO:0040007 growth BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048316 seed development BP
GO:0048364 root development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048767 root hair elongation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0061458 reproductive system development BP
GO:0070011 peptidase activity MF
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071695 anatomical structure maturation BP
GO:0071704 organic substance metabolic process BP
GO:0080147 root hair cell development BP
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0099402 plant organ development BP
GO:0101005 deubiquitinase activity MF
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1905392 plant organ morphogenesis BP