PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107430831 View in Genome Browser
Position	NC_063297.1:19870147-19871367 (-) 1220bp
Gene Type	gene
Gene Description (Protein Product)	The light-harvesting complex (LHC) functions as a light receptor; it captures and delivers excitation energy to photosystems with which it is closely associated
Organism	Ziziphus jujuba
Also AS	AT3G08940

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125420346 PsaA and PsaB bind P700; the primary electron donor of photosystem I (PSI); as well as the electron acceptors A0; A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase; converting photonic excitation into a charge separation; which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0; A1; FX; FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin

gene-LOC125419930 NAD(P)H-quinone oxidoreductase chain 4

gene-LOC125419606 One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase; using light energy to abstract electrons from H(2)O; generating O(2) and a proton gradient subsequently used for ATP formation

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00196	Photosynthesis - antenna proteins	The chlorophyll-binding subunits of photosystems I and II are internal antenna light-harvesting proteins of oxygenic photosynthesis. The antenna proteins that exist in phycobilisomes in cyanobacteria and light-harvesting chlorophyll protein complexes in green plants act as peripheral antenna systems, enabling more efficient absorption of light energy.