Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107432285
View in Genome Browser
Position
NC_063298.1:7822802-7828798 (+)
5996bp
Gene Type
gene
Gene Description (Protein Product)
glutamate carboxypeptidase 2
Organism
Ziziphus jujuba
Also AS AT3G54720

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC107434035 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC107432461 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC112488804 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003002 regionalization BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004180 carboxypeptidase activity MF
GO:0004181 metallocarboxypeptidase activity MF
GO:0005575 cellular_component CC
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008235 metalloexopeptidase activity MF
GO:0008237 metallopeptidase activity MF
GO:0008238 exopeptidase activity MF
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009888 tissue development BP
GO:0009908 flower development BP
GO:0009909 regulation of flower development BP
GO:0010015 root morphogenesis BP
GO:0010051 xylem and phloem pattern formation BP
GO:0010073 meristem maintenance BP
GO:0010074 maintenance of meristem identity BP
GO:0010075 regulation of meristem growth BP
GO:0010080 regulation of floral meristem growth BP
GO:0010081 regulation of inflorescence meristem growth BP
GO:0010082 regulation of root meristem growth BP
GO:0010154 fruit development BP
GO:0010305 leaf vascular tissue pattern formation BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0019827 stem cell population maintenance BP
GO:0022414 reproductive process BP
GO:0022622 root system development BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0040008 regulation of growth BP
GO:0043170 macromolecule metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044425 obsolete membrane part CC
GO:0048316 seed development BP
GO:0048364 root development BP
GO:0048367 shoot system development BP
GO:0048507 meristem development BP
GO:0048509 regulation of meristem development BP
GO:0048580 regulation of post-embryonic development BP
GO:0048608 reproductive structure development BP
GO:0048638 regulation of developmental growth BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070011 peptidase activity MF
GO:0071704 organic substance metabolic process BP
GO:0080050 regulation of seed development BP
GO:0090567 reproductive shoot system development BP
GO:0098727 maintenance of cell number BP
GO:0099402 plant organ development BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1905392 plant organ morphogenesis BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000034 regulation of seed maturation BP
GO:2000241 regulation of reproductive process BP
GO:2000280 regulation of root development BP