PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107432327 View in Genome Browser
Position	NC_063287.1:39177272-39181228 (+) 3956bp
Gene Type	gene
Gene Description (Protein Product)	Electron transfer flavoprotein subunit alpha
Organism	Ziziphus jujuba
Also AS	AT1G50940

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125422296 Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria; which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins

gene-LOC107435083 citrate synthase

gene-LOC125420457 NDH shuttles electrons from NAD(P)H plastoquinone; via FMN and iron-sulfur (Fe-S) centers; to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation; and thus conserves the redox energy in a proton gradient

Regulatory gene

gene-LOC107405089 Protein BASIC PENTACYSTEINE2-like

gene-LOC107420393 Protein BASIC PENTACYSTEINE6-like

gene-LOC107426555 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005507	copper ion binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006082	organic acid metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006629	lipid metabolic process	BP
GO:0006631	fatty acid metabolic process	BP
GO:0006635	fatty acid beta-oxidation	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009055	electron transfer activity	MF
GO:0009056	catabolic process	BP
GO:0009062	fatty acid catabolic process	BP
GO:0009987	cellular process	BP
GO:0016042	lipid catabolic process	BP
GO:0016054	organic acid catabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0019395	fatty acid oxidation	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0022900	electron transport chain	BP
GO:0030258	lipid modification	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase	BP
GO:0034440	lipid oxidation	BP
GO:0036094	small molecule binding	MF
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044242	cellular lipid catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046395	carboxylic acid catabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0048037	obsolete cofactor binding	MF
GO:0050660	flavin adenine dinucleotide binding	MF
GO:0050662	obsolete coenzyme binding	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072329	monocarboxylic acid catabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901575	organic substance catabolic process	BP