Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107432692
View in Genome Browser
Position
NC_063298.1:13818571-13820393 (-)
1822bp
Gene Type
gene
Gene Description (Protein Product)
Transcription repressor
Organism
Ziziphus jujuba
Also AS AT3G13540

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125423907 Nuclear transcription factor Y subunit
gene-LOC125423909 No apical meristem (NAM) protein
gene-LOC107432867 WRKY transcription factor
Target gene
gene-LOC107403326 receptor-like protein 12
gene-LOC107403340 Domain of unknown function (DUF4220)
gene-LOC107403528 Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific MF
GO:0000988 obsolete transcription factor activity, protein binding MF
GO:0000989 obsolete transcription factor activity, transcription factor binding MF
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0001076 obsolete transcription factor activity, RNA polymerase II transcription factor binding MF
GO:0001134 obsolete transcription regulator recruiting activity MF
GO:0001135 obsolete RNA polymerase II transcription regulator recruiting activity MF
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010026 trichome differentiation BP
GO:0010090 trichome morphogenesis BP
GO:0010154 fruit development BP
GO:0010191 mucilage metabolic process BP
GO:0010192 mucilage biosynthetic process BP
GO:0010214 seed coat development BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0016043 cellular component organization BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0030154 cell differentiation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044212 transcription cis-regulatory region binding MF
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048316 seed development BP
GO:0048354 mucilage biosynthetic process involved in seed coat development BP
GO:0048359 mucilage metabolic process involved in seed coat development BP
GO:0048468 cell development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090558 plant epidermis development BP
GO:0090626 plant epidermis morphogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP