PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107433045 View in Genome Browser
Position	NC_063298.1:19516963-19520022 (+) 3059bp
Gene Type	gene
Gene Description (Protein Product)	wuschel-related homeobox
Organism	Ziziphus jujuba
Also AS	AT5G17810

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107435591 structural constituent of cytoskeleton

gene-LOC107435591 Tubulin is the major constituent of microtubules. It binds two moles of GTP; one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

gene-LOC125419824 E3 ubiquitin-protein ligase

Target gene

gene-LOC107403244 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1;5-bisphosphate; the primary event in carbon dioxide fixation; as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site

gene-LOC107404219 protein At1g04910-like isoform X1

gene-LOC107405196 Belongs to the universal ribosomal protein uS17 family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0006355	regulation of DNA-templated transcription	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0022622	root system development	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0048364	root development	BP
GO:0048731	system development	BP
GO:0048830	adventitious root development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0099402	plant organ development	BP
GO:0140110	transcription regulator activity	MF
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP