PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107433604 View in Genome Browser
Position	NC_063298.1:7772188-7775044 (-) 2856bp
Gene Type	gene
Gene Description (Protein Product)	f-box protein
Organism	Ziziphus jujuba
Also AS	AT5G06550

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107435446 Cyclic pyranopterin monophosphate synthase

gene-LOC107435882 ribosomal RNA small subunit methyltransferase

gene-LOC125421561 lysine-specific demethylase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000976	transcription cis-regulatory region binding	MF
GO:0000987	cis-regulatory region sequence-specific DNA binding	MF
GO:0001067	transcription regulatory region nucleic acid binding	MF
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003690	double-stranded DNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0006325	chromatin organization	BP
GO:0006464	protein modification process	BP
GO:0006479	protein methylation	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008213	protein alkylation	BP
GO:0009987	cellular process	BP
GO:0010029	regulation of seed germination	BP
GO:0010030	positive regulation of seed germination	BP
GO:0016043	cellular component organization	BP
GO:0016569	obsolete covalent chromatin modification	BP
GO:0016570	histone modification	BP
GO:0016571	histone methylation	BP
GO:0018193	peptidyl-amino acid modification	BP
GO:0018195	peptidyl-arginine modification	BP
GO:0018216	peptidyl-arginine methylation	BP
GO:0019538	protein metabolic process	BP
GO:0032259	methylation	BP
GO:0034969	histone arginine methylation	BP
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043414	macromolecule methylation	BP
GO:0043565	sequence-specific DNA binding	MF
GO:0043985	histone H4-R3 methylation	BP
GO:0044212	transcription cis-regulatory region binding	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0048518	positive regulation of biological process	BP
GO:0048580	regulation of post-embryonic development	BP
GO:0048582	positive regulation of post-embryonic development	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0051094	positive regulation of developmental process	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051240	positive regulation of multicellular organismal process	BP
GO:0051276	chromosome organization	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0097159	organic cyclic compound binding	MF
GO:1900140	regulation of seedling development	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1990837	sequence-specific double-stranded DNA binding	MF
GO:2000026	regulation of multicellular organismal development	BP