Basic Information
Gene ID
gene-LOC107434311
Position
NC_063287.1:40339291-40342274 (-)
2983bp
Gene Type
gene
Gene Description (Protein Product)
V-type proton ATPase subunit
Organism
Also AS AT5G55290

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125418750 V-type proton ATPase catalytic subunit
gene-LOC125420043 Mitochondrial ATP synthase g subunit
gene-LOC125423916 ATP synthase g subunit family protein
Regulatory gene
gene-LOC107403836 RWP-RK domain
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map01100 Metabolic pathways -
map00190 Oxidative phosphorylation -