PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107435000 View in Genome Browser
Position	NC_063292.1:10533907-10538596 (+) 4689bp
Gene Type	gene
Gene Description (Protein Product)	Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants; fungi and bacteria
Organism	Ziziphus jujuba
Also AS	AT1G37130

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107435446 Cyclic pyranopterin monophosphate synthase

gene-LOC125423701 Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex; serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. After interaction with MOCS2B; the sulfur is then transferred to precursor Z to form molybdopterin

gene-LOC125423784 Persulfide dioxygenase ETHE1 homolog

Regulatory gene

gene-LOC107403899 dof zinc finger protein

gene-LOC107404240 Dof zinc finger protein

gene-LOC107405089 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001505	regulation of neurotransmitter levels	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0006082	organic acid metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006809	nitric oxide biosynthetic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008940	nitrate reductase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009608	response to symbiont	BP
GO:0009610	response to symbiotic fungus	BP
GO:0009620	response to fungus	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009703	nitrate reductase (NADH) activity	MF
GO:0009987	cellular process	BP
GO:0016020	membrane	CC
GO:0016491	oxidoreductase activity	MF
GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	MF
GO:0017144	xenobiotic metabolic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042126	nitrate metabolic process	BP
GO:0042128	nitrate assimilation	BP
GO:0042133	neurotransmitter metabolic process	BP
GO:0042136	neurotransmitter biosynthetic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046209	nitric oxide metabolic process	BP
GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	MF
GO:0050896	response to stimulus	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071704	organic substance metabolic process	BP
GO:0071941	nitrogen cycle metabolic process	BP
GO:0071944	cell periphery	CC
GO:0072593	reactive oxygen species metabolic process	BP
GO:1903409	reactive oxygen species biosynthetic process	BP
GO:2001057	reactive nitrogen species metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00910	Nitrogen metabolism	-